WormBase Tree Display for Variation: WBVar00243572

WBVar00243572 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00243572
    Other_name: snp_C39E6[1]
      cewivar00273144
      C39E6.1.1:c.1172+191T>A
    HGVSg: CHROMOSOME_X:g.4745942A>T
  Sequence_details: SMap: S_parent: Sequence: C39E6
    Flanking_sequences: gtggcacaatccctcttagcataac attctgccacgagaatctatgaaac
    Mapping_target: C39E6
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
    Analysis: SNP_Wicks
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00003056
    Transcript: C39E6.1.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C39E6.1.1:c.1172+191T>A
        Intron_number: 9/12
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.7349 VarS=AT
    Enzymes. Bristol-specific: [MluCI,Sse9I,TasI,TseCI,Tsp509I,TspEI]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_C39E6.1
    [20040130 db] this Allele was previously named snp_C39E6.1
    [20090224 db] original Wicks name : C39E6:4228..5118@137 Psnp=0.7349 VarS=AT
    [20090224 db] original Wicks id : yw12h12.s1@689,t,33
    [20090224 db] Snip-SNP
  Method: SNP_Wicks