WormBase Tree Display for Variation: WBVar00247619

WBVar00247619 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00247619
    Other_name: snp_Y54G2A[7]
      Y54G2A.38.1:c.715-135_715-131del
    HGVSg: CHROMOSOME_IV:g.2761697_2761701del
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: cacgcgctctgcgtctccccccccc ccccacactctccctgcctaaactt
    Mapping_target: Y54G2A
    Type_of_mutation: Deletion: CCCCC
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00043061
    Transcript: Y54G2A.38.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.38.1:c.715-135_715-131del
        Intron_number: 4/5
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9195 VarD5=CCCCC
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_Y54G2.7
    [20040130 db] this Allele was previously named snp_Y54G2.7
    [20090224 db] this Variation was previously named snp_Y54G2[7]
    [20090224 db] original Wicks name : Y54G2A:11088..11808@393 Psnp=0.9195 VarD5=CCCCC
    [20090224 db] original Wicks id : vl29e11.s1@460,-,53
  Method: SNP_Wicks