WormBase Tree Display for Variation: WBVar00247623

WBVar00247623 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00247623
    Other_name: snp_Y54G2A[11]
      Y54G2A.39b.1:c.559-243_559-242insT
    HGVSg: CHROMOSOME_IV:g.2827198_2827199insT
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: caaaacatgagccacagaagttgag cggtcgatgcagaatgttagaagtc
    Mapping_target: Y54G2A
    Type_of_mutation: Insertion: T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00043062
    Transcript: Y54G2A.39b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.39b.1:c.559-243_559-242insT
        Intron_number: 5/8
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.6214 VarI1=T
    Enzymes. Bristol-specific: [AccBSI,AciI,Bce1247I,BceCI,BspWI,BsrBI,Bst31NI,BstD102I,HpyF10VI,MbiI,MwoI]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_Y54G2.11
    [20040130 db] this Allele was previously named snp_Y54G2.11
    [20090224 db] this Variation was previously named snp_Y54G2[11]
    [20090224 db] original Wicks name : Y54G2A:76816..77690@162 Psnp=0.6214 VarI1=T
    [20090224 db] original Wicks id : vl27f02.s1@89,t,32
    [20090224 db] Snip-SNP
  Method: SNP_Wicks