WormBase Tree Display for Variation: WBVar00249264
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| WBVar00249264 | Evidence | Paper_evidence | WBPaper00005092 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | tg50 | |||||
| Other_name | CE30741:p.Gln43Ter | ||||||
| CE30740:p.Gln43Ter | |||||||
| D2030.10a.1:c.127C>T | |||||||
| D2030.10b.1:c.127C>T | |||||||
| HGVSg | CHROMOSOME_I:g.7602639C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | D2030 | |||
| Flanking_sequences | cagatatttaaagtcaaagatcacttgaat | agctgcgaaaaaaatgtgagaaatttgtga | |||||
| Mapping_target | D2030 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00005092 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00024089 | ||||||
| Laboratory | KY | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00000084 | |||||
| Transcript | D2030.10b.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | D2030.10b.1:c.127C>T | ||||||
| HGVSp | CE30741:p.Gln43Ter | ||||||
| cDNA_position | 127 | ||||||
| CDS_position | 127 | ||||||
| Protein_position | 43 | ||||||
| Exon_number | 2/20 | ||||||
| Codon_change | Cag/Tag | ||||||
| Amino_acid_change | Q/* | ||||||
| D2030.10a.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | D2030.10a.1:c.127C>T | ||||||
| HGVSp | CE30740:p.Gln43Ter | ||||||
| cDNA_position | 144 | ||||||
| CDS_position | 127 | ||||||
| Protein_position | 43 | ||||||
| Exon_number | 3/21 | ||||||
| Codon_change | Cag/Tag | ||||||
| Amino_acid_change | Q/* | ||||||
| Genetics | Interpolated_map_position | I | 2.20286 | ||||
| Reference | WBPaper00005092 | ||||||
| Method | Substitution_allele |
