WormBase Tree Display for Variation: WBVar00249359

WBVar00249359 Name: Public_name: tm311
    Other_name: R03E9.1.1:c.154+23_436-130del
    HGVSg: CHROMOSOME_X:g.6742662_6743129del
  Sequence_details: SMap: S_parent: Sequence: R03E9
    Flanking_sequences: ttcaaatggtaaagacatgacatttcgtaa ttttccaattagtcccactactcccacaac
    Mapping_target: R03E9
    Source_location: 7 CHROMOSOME_X 6742661 6743130 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm311_external
      tm311_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 311
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00003163
    Transcript: R03E9.1.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: R03E9.1.1:c.154+23_436-130del
        Intron_number: 2-3/4
        Exon_number: 3/5
    Interactor: WBInteraction000524630
      WBInteraction000524631
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Description: Phenotype: WBPhenotype:0000031 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Comment from Dr. B. Conradt to the National Bioresource Project of Japan: slow growth at 15C (possibly lethal). Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: MD
      WBPhenotype:0000039 Paper_evidence: WBPaper00061439
        Curator_confirmed: WBPerson49407
    Phenotype_not_observed (8)
  Reference: WBPaper00040863
    WBPaper00061439
  Remark (2)
  Method: NBP_knockout_allele