WormBase Tree Display for Variation: WBVar00249589

WBVar00249589 Name: Public_name: tm550
    Other_name: F26F4.13.1:c.96+4_380delinsTTCGGGGG
    HGVSg: CHROMOSOME_III:g.4903396_4903771delinsCCCCCGAA
  Sequence_details: SMap: S_parent: Sequence: F26F4
    Flanking_sequences: gctttcagttctttttcaatcttttcgatt taccattttccacaaatcctgggactctaa
    Mapping_target: F26F4
    Source_location: 7 CHROMOSOME_III 4903395 4903772 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: CCCCCGAA
      Deletion
    PCR_product: tm550_external
      tm550_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 550
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00017832
    Transcript: F26F4.13.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F26F4.13.1:c.96+4_380delinsTTCGGGGG
        cDNA_position: ?-394
        CDS_position: ?-380
        Protein_position: ?-127
        Intron_number: 2-3/4
        Exon_number: 3-4/5
  Isolation: Mutagen: TMP/UV
  Genetics: Map: III
    Mapping_data: In_multi_point: 4813
        4847
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson48
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson48
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson48
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson48
  Remark: 17649/17650-CCCCCGAA-18025/18026 (376 bp deletion + 8 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele