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WormBase Tree Display for Variation: WBVar00249826

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Name Class

WBVar00249826Name (2)
Sequence_detailsSMapS_parentSequenceY17G7A
Flanking_sequencescggagaacgctgtcaaaaatgagacggattacggatttttgggggaatttgtaattaaaa
Mapping_targetY17G7A
Source_location7CHROMOSOME_II1191675011918029Inferred_automaticallyNational_Bioresource_Project
Type_of_mutationInsertionTTTNTTTTTGCTCCAAATTCCCNCAGNTTCNGGTTNCCCCAACCCTGGTTCCCGTANTANANNTTTGATATTAT
Deletion
PCR_producttm798_external
tm798_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryFX
AuthorMitani S
DB_infoDatabaseNational_Bioresource_Projectseq798
NBP_allele
StatusLive
AffectsGeneWBGene00001977
WBGene00003015
TranscriptY17G7A.1.1VEP_consequencecoding_sequence_variant,3_prime_UTR_variant
VEP_impactMODIFIER
cDNA_position189-?
CDS_position188-?
Protein_position63-?
Exon_number3-4/4
W03C9.4a.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
cDNA_position1685-?
Exon_number11/11
W03C9.4b.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
cDNA_position1903-?
Exon_number13/13
IsolationMutagenTMP/UV
GeneticsMapII
Description (2)
Remark743/744-TTTNTTTTTGCTCCAAATTCCCNCAGNTTCNGGTTNCCCCAACCCTGGTTCCCGTANTANANNTTTGATATTAT-2021/2022 (1278 bp deletion + 74 bp insertion)
This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use.Paper_evidenceWBPaper00041807
MethodNBP_knockout_allele