WormBase Tree Display for Variation: WBVar00249850

WBVar00249850 Name: Public_name: tm823
    Other_name: C54H2.5.1:c.70-10_557delinsAACTATGAACTTTAAA
    HGVSg: CHROMOSOME_X:g.5780052_5780595delinsTTTAAAGTTCATAGTT
  Sequence_details: SMap: S_parent: Sequence: C54H2
    Flanking_sequences: ccaacaacaatctccaaaacttgcatgaag caagtttaaagttcatagttcatataatag
    Mapping_target: C54H2
    Source_location: 7 CHROMOSOME_X 5780051 5780596 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: TTTAAAGTTCATAGTT
      Deletion
    PCR_product: tm823_external
      tm823_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 823
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00004788
    Transcript: C54H2.5.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C54H2.5.1:c.70-10_557delinsAACTATGAACTTTAAA
        cDNA_position: ?-567
        CDS_position: ?-557
        Protein_position: ?-186
        Intron_number: 2-3/5
        Exon_number: 3-4/6
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 33386/33387-TTTAAAGTTCATAGTT-33930/33931 (544 bp deletion + 16 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele