WormBase Tree Display for Variation: WBVar00249923

WBVar00249923 Name: Public_name: tm901
    HGVSg
  Sequence_details: SMap: S_parent: Sequence: F52E1
    Flanking_sequences: gatttacaggtttattacaaaggtgtgtca aaaaatcatgatgtttcagatgatgggaca
    Mapping_target: F52E1
    Source_location: 7 CHROMOSOME_V 8388206 8388738 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: CCTTTNAATTT
      Deletion
    PCR_product: tm901_external
      tm901_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 901
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00001534
    Transcript: F52E1.4a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 4-7/18
        Exon_number: 5-7/19
      F52E1.4c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 4-7/20
        Exon_number: 5-7/21
      F52E1.4b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 4-7/20
        Exon_number: 5-7/21
  Isolation: Mutagen: TMP/UV
  Genetics: Map: V
  Description: Phenotype_not_observed (13)
  Reference: WBPaper00033467
    WBPaper00037908
  Remark: 8808/8809-CCTTTNAATTT-9339/9340 (531 bp deletion + 11 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele