WormBase Tree Display for Variation: WBVar00249986

WBVar00249986 Name: Public_name: tm964
    HGVSg: CHROMOSOME_III:g.9392303_9393466del
  Sequence_details: SMap: S_parent: Sequence: C38C10
    Flanking_sequences: cgtagaagagagcacttctgtaaaaataga ccgctttctgatatgtcgtcaaatgtgttg
    Mapping_target: C38C10
    Source_location: 7 CHROMOSOME_III 9392302 9393467 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm964_external
      tm964_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 964
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00001689
    Transcript: C38C10.4.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2-3/5
        Exon_number: 1-3/6
  Isolation: Mutagen: TMP/UV
  Genetics: Map: III
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0000697 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Comment from Dr. J. Ahringer to the National Bioresource Project of Japan: non-Pvl. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0001225 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Comment from Dr. H. Sawa to the National Bioresource Project of Japan: not Psa Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 22516/22517-23680/23681 (1164 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele