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WormBase Tree Display for Variation: WBVar00250124

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Name Class

WBVar00250124NamePublic_nametm1107
Other_nameD2013.5.1:c.990_1357del
CE42493:p.Ser331HisfsTer2
HGVSgCHROMOSOME_II:g.9327052_9327468del
Sequence_detailsSMapS_parentSequenceD2013
Flanking_sequencesgatgacaagagctccagtgaaggtaacactgcattgatccatcaggaaaacgcacgattc
Mapping_targetD2013
Source_location7CHROMOSOME_II93270519327469Inferred_automaticallyNational_Bioresource_Project
Type_of_mutationDeletion
PCR_producttm1107_external
tm1107_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryFX
AuthorMitani S
DB_infoDatabaseNational_Bioresource_Projectseq1107
NBP_allele
StatusLive
AffectsGeneWBGene00001134
TranscriptD2013.5.1 (11)
InteractorWBInteraction000009229
IsolationMutagenTMP/UV
GeneticsMapII
DescriptionPhenotypeWBPhenotype:0000062Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkClassified as lethal OR sterile by the National Bioresource Project of Japan. Comment to the NBP from Dr. D. Xue: Mol Cell 31, 586 (2008).Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
Laboratory_evidenceFX
WBPhenotype:0000273Paper_evidenceWBPaper00056369
Curator_confirmedWBPerson9270
WBPhenotype:0000688Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkClassified as lethal OR sterile by the National Bioresource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
Laboratory_evidenceFX
ReferenceWBPaper00056369
Remark27442/27443-27859/27860 (417 bp deletion)
This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use.Paper_evidenceWBPaper00041807
MethodNBP_knockout_allele