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WormBase Tree Display for Variation: WBVar00250164

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Name Class

WBVar00250164NamePublic_nametm1148
Other_nameC08B11.8.2:c.-123_-2-16del
HGVSgCHROMOSOME_II:g.8039805_8039992del
Sequence_detailsSMapS_parentSequenceC08B11
Flanking_sequencesatttttatgatggcctagaaacttgaattgaatgaaatttttcagacatgaaagaaagaa
Mapping_targetC08B11
Source_location7CHROMOSOME_II80398048039993Inferred_automaticallyNational_Bioresource_Project
Type_of_mutationDeletion
PCR_producttm1148_external
tm1148_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryFX
AuthorMitani S
DB_infoDatabaseNational_Bioresource_Projectseq1148
NBP_allele
StatusLive
AffectsGeneWBGene00007435
TranscriptC08B11.8.2VEP_consequencesplice_donor_variant,5_prime_UTR_variant,intron_variant
VEP_impactHIGH
HGVScC08B11.8.2:c.-123_-2-16del
cDNA_position4-?
Intron_number1/7
Exon_number1/8
IsolationMutagenTMP/UV
GeneticsMapII
DescriptionPhenotype_not_observedWBPhenotype:0000032Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkComment from Dr. H. Inoue to the National Bioresource Project of Japan: healthy.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
WBPhenotype:0000062Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkClassified as homozygous viable by the National BioResource Project of Japan. Expression of the C08B11.7 gene was detected by RT-PCR.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
WBPhenotype:0000643Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkComment from Dr. H. Inoue to the National Bioresource Project of Japan: normal locomotion.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
WBPhenotype:0000688Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkComment from Dr. H. Inoue to the National Bioresource Project of Japan: fertile.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
Remark23682/23683-23870/23871 (188 bp deletion)
This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use.Paper_evidenceWBPaper00041807
MethodNBP_knockout_allele