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WormBase Tree Display for Variation: WBVar00250201

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Name Class

WBVar00250201NamePublic_nametm1189
Other_nameC06H2.2.1:c.267_700delinsAA
CE43824:p.Trp89_Ter234delinsTer
HGVSgCHROMOSOME_V:g.11125981_11126463delinsAA
Sequence_detailsSMapS_parentSequenceC06H2
Flanking_sequencestgctcatcgaaagacacctggaaaaggatgacattttaacatattgtgacaatccagagg
Mapping_targetC06H2
Source_location7CHROMOSOME_V1112598011126464Inferred_automaticallyNational_Bioresource_Project
Type_of_mutationInsertionAA
Deletion
PCR_producttm1189_external
tm1189_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryFX
AuthorMitani S
DB_infoDatabaseNational_Bioresource_Projectseq1189
NBP_allele
StatusLive
AffectsGeneWBGene00007386
TranscriptC06H2.2.1 (11)
IsolationMutagenTMP/UV
GeneticsMapV
DescriptionPhenotype_not_observedWBPhenotype:0000050Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkComment from Dr. H. Arai to the National Bioresource Project of Japan: WT embryonic lethality.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
WBPhenotype:0000054Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkComment from Dr. H. Arai to the National Bioresource Project of Japan: WT larval lehtality.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
WBPhenotype:0000062Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkClassified as homozygous viable by the National BioResource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
WBPhenotype:0000673Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkComment from Dr. H. Arai to the National Bioresource Project of Japan: WT brood size.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
WBPhenotype:0000676Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkComment from Dr. H. Arai to the National Bioresource Project of Japan: WT growth rate.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
Remark4463/4464-AA-4946/4947 (483 bp deletion + 2 bp insertion)
This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use.Paper_evidenceWBPaper00041807
MethodNBP_knockout_allele