WormBase Tree Display for Variation: WBVar00250298

WBVar00250298 Name: Public_name: tm1294
    Other_name: F54C4.3.1:c.813-96_1006-123delinsCG
    HGVSg: CHROMOSOME_III:g.83681_84494delinsCG
  Sequence_details: SMap: S_parent: Sequence: F54C4
    Flanking_sequences: gaattttggaccattttaagccaattttggaccattttaagccaattttggaccattttaagccaattttggaccattttaagccaattttggaccattttaagccaattt gaaaatcatcttttttacactagaaaatag
    Mapping_target: F54C4
    Source_location: 7 CHROMOSOME_III 83680 84495 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: CG
      Deletion
    PCR_product: tm1294_external
      tm1294_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 1294
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00018794
      WBGene00201686
    Transcript: F54C4.3.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F54C4.3.1:c.813-96_1006-123delinsCG
        Intron_number: 6-7/19
        Exon_number: 7/20
      F54C4.7 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
  Isolation: Mutagen: TMP/UV
  Genetics: Map: III
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 18894/18895-CG-19708/19709 (814 bp deletion + 2 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele