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WormBase Tree Display for Variation: WBVar00250324

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Name Class

WBVar00250324NamePublic_nametm1326
HGVSgCHROMOSOME_IV:g.9074444_9075059del
Sequence_detailsSMapS_parentSequenceZC410
Flanking_sequencescggccgcgtttgtgaaagttcttccattcgatccgaatttttcagggaacgcctcgccgg
Mapping_targetZC410
Source_location7CHROMOSOME_IV90744439075060Inferred_automaticallyNational_Bioresource_Project
Type_of_mutationDeletion
PCR_producttm1326_external
tm1326_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryFX
AuthorMitani S
DB_infoDatabaseNational_Bioresource_Projectseq1326
NBP_allele
StatusLive
AffectsGeneWBGene00013880
TranscriptZC410.2.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
VEP_impactHIGH
Intron_number2-4/10
Exon_number1-4/11
IsolationMutagenTMP/UV
GeneticsMapIV
DescriptionPhenotypeWBPhenotype:0000062Person_evidenceWBPerson7743
Curator_confirmedWBPerson48
RemarkClassified as lethal OR sterile by the National Bioresource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson48
Laboratory_evidenceFX
WBPhenotype:0000688Person_evidenceWBPerson7743
Curator_confirmedWBPerson48
RemarkClassified as lethal OR sterile by the National Bioresource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson48
Laboratory_evidenceFX
Remark8292/8293-8908/8909 (616 bp deletion)
This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use.Paper_evidenceWBPaper00041807
MethodNBP_knockout_allele