WormBase Tree Display for Variation: WBVar00250725

WBVar00250725 Name: Public_name: tm1760
    HGVSg: CHROMOSOME_II:g.5773708_5774365del
  Sequence_details: SMap: S_parent: Sequence: F10C1
    Flanking_sequences: tatggaatattacatttaaattctagattt aacagatatatccagagatagtagtagaag
    Mapping_target: F10C1
    Source_location: 7 CHROMOSOME_II 5773707 5774366 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm1760_external
      tm1760_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 1760
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00017326
      WBGene00017324
    Transcript: F10C1.5.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2/6
        Exon_number: 1-2/7
      F10C1.1.1 VEP_consequence: coding_sequence_variant,5_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-137
        CDS_position: ?-137
        Protein_position: ?-46
        Exon_number: 1/1
  Isolation: Mutagen: TMP/UV
  Genetics: Map: II
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 30075/30076-30733/30734 (658 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele