WormBase Tree Display for Variation: WBVar00250817

WBVar00250817 Name: Public_name: tm1853
    Other_name: ZK993.1a.1:c.69-201_293del
    HGVSg: CHROMOSOME_I:g.1129009_1129845del
  Sequence_details: SMap: S_parent: Sequence: ZK993
    Flanking_sequences: gcaacgcgccgtaaatctaccccagatatggccgagc atatcaccatcaacactacgcctcccgacg
    Mapping_target: ZK993
    Source_location: 7 CHROMOSOME_I 1129008 1129846 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm1853_external
      tm1853_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 1853
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00022837
    Transcript: ZK993.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: ZK993.1a.1:c.69-201_293del
        cDNA_position: ?-328
        CDS_position: ?-293
        Protein_position: ?-98
        Intron_number: 2-3/6
        Exon_number: 3-4/7
      ZK993.1b.1 VEP_consequence: coding_sequence_variant,5_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-38
        CDS_position: ?-38
        Protein_position: ?-13
        Exon_number: 1/3
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
    Mapping_data: In_multi_point: 5345
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson48
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson48
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson48
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson48
            Laboratory_evidence: FX
  Remark: 28857/28858-29694/29695 (837 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele