WormBase Tree Display for Variation: WBVar00250871

WBVar00250871 Name: Public_name: tm1909
    HGVSg: CHROMOSOME_III:g.1037146_1037899del
  Sequence_details: SMap: S_parent: Sequence: BE0003N10
    Flanking_sequences: attttagcttttcggatatttttaaagctt gctacagtagtacaacggaaatccaagcaa
    Mapping_target: BE0003N10
    Source_location: 7 CHROMOSOME_III 1037145 1037900 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm1909_external
      tm1909_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00040400
      WBStrain00040407
      WBStrain00040408
      WBStrain00040410
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 1909
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00015266
      WBGene00015267
    Transcript: BE0003N10.1.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-206
        CDS_position: ?-189
        Protein_position: ?-63
        Intron_number: 2-3/11
        Exon_number: 1-4/12
      BE0003N10.2.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2/10
        Exon_number: 1-2/11
    Interactor: WBInteraction000504196
  Isolation: Mutagen: TMP/UV
  Genetics: Map: III
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson48
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson48
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson48
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson48
            Laboratory_evidence: FX
  Remark: 5703/5704-6457/6458 (754 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele