WormBase Tree Display for Variation: WBVar00250900
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| WBVar00250900 | Name | Public_name | tm1939 | |||||
|---|---|---|---|---|---|---|---|---|
| Other_name | CE20165:p.Phe30CysfsTer4 | |||||||
| W09C5.2.1:c.89_354del | ||||||||
| HGVSg | CHROMOSOME_I:g.13629321_13629649del | |||||||
| Sequence_details | SMap | S_parent | Sequence | W09C5 | ||||
| Flanking_sequences | agcacaaagaaaatccgaattactggggat | gctgtcaataattcaaagtggtgaggaaaa | ||||||
| Mapping_target | W09C5 | |||||||
| Source_location | 7 | CHROMOSOME_I | 13629320 | 13629650 | Inferred_automatically | National_Bioresource_Project | ||
| Type_of_mutation | Deletion | |||||||
| PCR_product | tm1939_external | |||||||
| tm1939_internal | ||||||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Allele | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Laboratory | FX | |||||||
| Author | Mitani S | |||||||
| DB_info | Database | National_Bioresource_Project | seq | 1939 | ||||
| NBP_allele | ||||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00006793 | ||||||
| Transcript | W09C5.2.1 (11) | |||||||
| Isolation | Mutagen | TMP/UV | ||||||
| Genetics | Map | I | ||||||
| Description | Phenotype | WBPhenotype:0000352 | Person_evidence | WBPerson7743 | ||||
| Curator_confirmed | WBPerson712 | |||||||
| Remark | Comment to the National Bioresource Project of Japan from Dr. F.P. Finger: Unc particularly in backing. | Person_evidence | WBPerson7743 | |||||
| Curator_confirmed | WBPerson712 | |||||||
| WBPhenotype:0000640 | Person_evidence | WBPerson7743 | ||||||
| Curator_confirmed | WBPerson712 | |||||||
| Remark | Comment to the National Bioresource Project of Japan from Dr. F.P. Finger: Egl. | Person_evidence | WBPerson7743 | |||||
| Curator_confirmed | WBPerson712 | |||||||
| WBPhenotype:0000643 | Person_evidence | WBPerson7743 | ||||||
| Curator_confirmed | WBPerson712 | |||||||
| Remark | Comment to the National Bioresource Project of Japan from Dr. F.P. Finger: Unc particularly in backing. | Person_evidence | WBPerson7743 | |||||
| Curator_confirmed | WBPerson712 | |||||||
| Phenotype_not_observed | WBPhenotype:0000062 | Person_evidence | WBPerson7743 | |||||
| Curator_confirmed | WBPerson712 | |||||||
| Remark | Classified as homozygous viable by the National Bioresource Project of Japan. | Person_evidence | WBPerson7743 | |||||
| Curator_confirmed | WBPerson712 | |||||||
| Remark | 1185/1186-1514/1515 (329 bp deletion) | |||||||
| This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. | Paper_evidence | WBPaper00041807 | ||||||
| Method | NBP_knockout_allele |
