WormBase Tree Display for Variation: WBVar00251057

WBVar00251057 Name: Public_name: tm2117
    HGVSg: CHROMOSOME_II:g.2684019_2684595delinsTTTATTTATTTTCAAAAACCCGGCAAA
  Sequence_details: SMap: S_parent: Sequence: F34D6
    Flanking_sequences: acatttattttcaaaaaacccggcaaaaac tacgtgcctacgtgcctacgtgcctaaata
    Mapping_target: F34D6
    Source_location: 7 CHROMOSOME_II 2684018 2684596 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: TTTATTTATTTTCAAAAACCCGGCAAA
      Deletion
    PCR_product: tm2117_external
      tm2117_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 2117
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00018022
    Transcript: F34D6.2.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1-2/5
        Exon_number: 1-2/6
  Isolation: Mutagen: TMP/UV
  Genetics: Map: II
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson48
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson48
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson48
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson48
            Laboratory_evidence: FX
  Remark: 5481/5482-TTTATTTATTTTCAAAAACCCGGCAAA-6058/6059 (577 bp deletion + 27 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele