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WormBase Tree Display for Variation: WBVar00251194

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Name Class

WBVar00251194NamePublic_nametm2286
Other_nameF59F5.1.1:c.414_828del
CE41326:p.Gly140ArgfsTer3
HGVSgCHROMOSOME_X:g.10530832_10531390del
Sequence_detailsSMapS_parentSequenceF59F5
Flanking_sequencesaaaagatattctaatgttcaattgtttaggtatcagggattgaccagtatagctggaaag
Mapping_targetF59F5
Source_location7CHROMOSOME_X1053083110531391Inferred_automaticallyNational_Bioresource_Project
Type_of_mutationDeletion
PCR_producttm2286_external
tm2286_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryFX
AuthorMitani S
DB_infoDatabaseNational_Bioresource_Projectseq2286
NBP_allele
StatusLive
AffectsGeneWBGene00010340
TranscriptF59F5.1.1 (11)
IsolationMutagenTMP/UV
GeneticsMapX
DescriptionPhenotypeWBPhenotype:0000062Person_evidenceWBPerson7743
Curator_confirmedWBPerson48
RemarkClassified as lethal OR sterile by the National Bioresource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson48
Laboratory_evidenceFX
WBPhenotype:0000688Person_evidenceWBPerson7743
Curator_confirmedWBPerson48
RemarkClassified as lethal OR sterile by the National Bioresource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson48
Laboratory_evidenceFX
Phenotype_not_observedWBPhenotype:0000103Person_evidenceWBPerson7743
Curator_confirmedWBPerson557
RemarkComment from Dr. G. Hermann to the National Bioresource Project of Japan: wild-type gut granules.Person_evidenceWBPerson7743
Curator_confirmedWBPerson557
Remark657/658-1216/1217 (559 bp deletion)
This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use.Paper_evidenceWBPaper00041807
MethodNBP_knockout_allele