WormBase Tree Display for Variation: WBVar00251371

WBVar00251371 Name: Public_name: tm2491
    Other_name: R144.13.1:c.222+1_387del
    HGVSg: CHROMOSOME_III:g.5023594_5023869del
  Sequence_details: SMap: S_parent: Sequence: R144
    Flanking_sequences: gtgattcacattaagccatctgttgttcat gtcgtaaaaactatggtttcagcatttttg
    Mapping_target: R144
    Source_location: 7 CHROMOSOME_III 5023593 5023870 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm2491_external
      tm2491_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 2491
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00044648
    Transcript: R144.13.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: R144.13.1:c.222+1_387del
        cDNA_position: ?-447
        CDS_position: ?-387
        Protein_position: ?-129
        Intron_number: 3-4/5
        Exon_number: 4-5/6
  Isolation: Mutagen: TMP/UV
  Genetics: Map: III
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
  Remark: 25747/25748-26023/26024 (276 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele