WormBase Tree Display for Variation: WBVar00251642

WBVar00251642 Name: Public_name: tm2814
    Other_name: F10D11.6b.1:c.654+109_969del
      F10D11.6a.1:c.1233+109_1548del
    HGVSg: CHROMOSOME_I:g.8447195_8447684del
  Sequence_details: SMap: S_parent: Sequence: F10D11
    Flanking_sequences: ttgtttgcgatgaagccagtagaagaggga tatatcagaatttcaatgaaatatgtatga
    Mapping_target: F10D11
    Source_location: 7 CHROMOSOME_I 8447194 8447685 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm2814_external
      tm2814_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 2814
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00008652
    Transcript: F10D11.6a.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F10D11.6a.1:c.1233+109_1548del
        cDNA_position: ?-1555
        CDS_position: ?-1548
        Protein_position: ?-516
        Intron_number: 7/11
        Exon_number: 8/12
      F10D11.6b.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F10D11.6b.1:c.654+109_969del
        cDNA_position: ?-969
        CDS_position: ?-969
        Protein_position: ?-323
        Intron_number: 3/6
        Exon_number: 4/7
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson557
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson557
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson557
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson557
            Laboratory_evidence: FX
  Remark: 13821/13822-14311/14312 (490 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele