WormBase Tree Display for Variation: WBVar00251806

WBVar00251806 Name: Public_name: tm3020
    Other_name: R06F6.8b.1:c.1357-39_1502delinsA
      R06F6.8a.1:c.1357-39_1502delinsA
    HGVSg: CHROMOSOME_II:g.10818036_10818220delinsT
  Sequence_details: SMap: S_parent: Sequence: R06F6
    Flanking_sequences: ccaacaactccaatgacgtcatcattccaa ctctatcggaaaatacctacgtgcctacat
    Mapping_target: R06F6
    Source_location: 7 CHROMOSOME_II 10818035 10818221 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: T
      Deletion
    PCR_product: tm3020_external
      tm3020_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 3020
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00011071
    Transcript: R06F6.8a.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: R06F6.8a.1:c.1357-39_1502delinsA
        cDNA_position: ?-1531
        CDS_position: ?-1502
        Protein_position: ?-501
        Intron_number: 7/15
        Exon_number: 8/16
      R06F6.8b.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: R06F6.8b.1:c.1357-39_1502delinsA
        cDNA_position: ?-1531
        CDS_position: ?-1502
        Protein_position: ?-501
        Intron_number: 7/15
        Exon_number: 8/16
  Isolation: Mutagen: TMP/UV
  Genetics: Map: II
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 32797/32798-T-32982/32983 (185 bp deletion + 1 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele