WormBase Tree Display for Variation: WBVar00251925

WBVar00251925 Name: Public_name: tm3152
    HGVSg
  Sequence_details: SMap: S_parent: Sequence: F52H3
    Flanking_sequences: tcatatggaactggctgaaattagtttagt ggagaaggtgttgaagacaagttttccttc
    Mapping_target: F52H3
    Source_location: 7 CHROMOSOME_II 10010421 10010678 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: TCCCATCNAGANA
      Deletion
    PCR_product: tm3152_external
      tm3152_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 3152
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00002265
    Transcript: F52H3.7a.2 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 3206-?
        CDS_position: 3121-?
        Protein_position: 1041-?
        Intron_number: 6/9
        Exon_number: 6/10
      F52H3.7b.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 268-?
        CDS_position: 220-?
        Protein_position: 74-?
        Intron_number: 4/7
        Exon_number: 4/8
      F52H3.7b.2 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 3257-?
        CDS_position: 220-?
        Protein_position: 74-?
        Intron_number: 5/8
        Exon_number: 5/9
      F52H3.7a.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 3421-?
        CDS_position: 3121-?
        Protein_position: 1041-?
        Intron_number: 6/9
        Exon_number: 6/10
  Isolation: Mutagen: TMP/UV
  Genetics: Map: II
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 1641/1642-TCCCATCNAGANA-1897/1898 (256 bp deletion + 17 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele