WormBase Tree Display for Variation: WBVar00252053

WBVar00252053 Name: Public_name: tm3357
    Other_name: T04C10.2b.1:c.535+9_746delinsGATATAT
      T04C10.2a.1:c.535+9_740delinsGATATAT
    HGVSg: CHROMOSOME_X:g.14817573_14817901delinsATATATC
  Sequence_details: SMap: S_parent: Sequence: T04C10
    Flanking_sequences: aggtcgtcaagagcggattgggttaattgt tatcttaccaagagacgcgtcggtgacatg
    Mapping_target: T04C10
    Source_location: 7 CHROMOSOME_X 14817572 14817902 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: ATATATC
      Deletion
    PCR_product: tm3357_external
      tm3357_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 3357
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00001329
    Transcript: T04C10.2a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T04C10.2a.1:c.535+9_740delinsGATATAT
        cDNA_position: ?-753
        CDS_position: ?-740
        Protein_position: ?-247
        Intron_number: 3-4/7
        Exon_number: 4-5/8
      T04C10.2b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T04C10.2b.1:c.535+9_746delinsGATATAT
        cDNA_position: ?-766
        CDS_position: ?-746
        Protein_position: ?-249
        Intron_number: 3-4/7
        Exon_number: 4-5/8
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 8675/8676-ATATATC-9004/9005 (329 bp deletion + 7 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele