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WormBase Tree Display for Variation: WBVar00252083

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Name Class

WBVar00252083NamePublic_nametm3392
Other_nameCE32610:p.Asp180_Ter428delinsGlu
C43E11.4.1:c.540_1283del
HGVSgCHROMOSOME_I:g.4248346_4249223del
Sequence_detailsSMapS_parentSequenceC43E11
Flanking_sequencesagcggatttggttgaagaagatgatctggagaaacataatcttaaaaagtccgctgaaaa
Mapping_targetC43E11
Source_location7CHROMOSOME_I42483454249224Inferred_automaticallyNational_Bioresource_Project
Type_of_mutationDeletion
PCR_producttm3392_external
tm3392_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryFX
AuthorMitani S
DB_infoDatabaseNational_Bioresource_Projectseq3392
NBP_allele
StatusLive
AffectsGeneWBGene00007001
TranscriptC43E11.4.1 (11)
IsolationMutagenTMP/UV
GeneticsMapI
DescriptionPhenotypeWBPhenotype:0000062Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkClassified as lethal OR sterile by the National Bioresource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
Laboratory_evidenceFX
WBPhenotype:0000688Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkClassified as lethal OR sterile by the National Bioresource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
Laboratory_evidenceFX
Remark19342/19343-20220/20221 (878 bp deletion)
This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use.Paper_evidenceWBPaper00041807
MethodNBP_knockout_allele