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WormBase Tree Display for Variation: WBVar00252127

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Name Class

WBVar00252127NamePublic_nametm3449
Other_nameY94H6A.9a.1:c.378-654_378-99delinsA
Y94H6A.9d.1:c.378-654_378-99delinsA
Y94H6A.9b.1:c.54-654_54-99delinsA
HGVSgCHROMOSOME_IV:g.2723292_2723847delinsT
Sequence_detailsSMapS_parentSequenceY94H6A
Flanking_sequencesaaattggagaattttcaatttttttttcgttaaattttcaggcaaaaaaccgagattttc
Mapping_targetY94H6A
Source_location7CHROMOSOME_IV27232912723848Inferred_automaticallyNational_Bioresource_Project
Type_of_mutationInsertionT
Deletion
PCR_producttm3449_external
tm3449_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryFX
AuthorMitani S
DB_infoDatabaseNational_Bioresource_Projectseq3449
NBP_allele
StatusLive
AffectsGeneWBGene00022381
TranscriptY94H6A.9a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY94H6A.9a.1:c.378-654_378-99delinsA
Intron_number4/7
Y94H6A.9b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY94H6A.9b.1:c.54-654_54-99delinsA
Intron_number1/3
Y94H6A.9d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY94H6A.9d.1:c.378-654_378-99delinsA
Intron_number4/4
IsolationMutagenTMP/UV
GeneticsMapIV
DescriptionPhenotype_not_observedWBPhenotype:0000062Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkClassified as homozygous viable by the National Bioresource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
Laboratory_evidenceFX
Remark50959/50960-T-51515/51516 (556 bp deletion + 1 bp insertion)
This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use.Paper_evidenceWBPaper00041807
MethodNBP_knockout_allele