WormBase Tree Display for Variation: WBVar00252135

WBVar00252135 Name: Public_name: tm3459
    Other_name: E02H1.5.1:c.382+1_553-21del
    HGVSg: CHROMOSOME_II:g.9595703_9595955del
  Sequence_details: SMap: S_parent: Sequence: E02H1
    Flanking_sequences: attcccaaaatccacttaaccgacttgatt aaaaataaaatttctttcagaaaactctaa
    Mapping_target: E02H1
    Source_location: 7 CHROMOSOME_II 9595702 9595956 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm3459_external
      tm3459_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 3459
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00008457
    Transcript: E02H1.5.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: E02H1.5.1:c.382+1_553-21del
        Intron_number: 4-5/7
        Exon_number: 5/8
  Isolation: Mutagen: TMP/UV
  Genetics: Map: II
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson2021
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson2021
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson2021
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson2021
  Remark: 7161/7162-7414/7415 (253 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele