WormBase Tree Display for Variation: WBVar00252328

WBVar00252328 Name: Public_name: tm3715
    Other_name: F28D1.8.1:c.751_1040+77del
    HGVSg: CHROMOSOME_IV:g.12388253_12388670del
  Sequence_details: SMap: S_parent: Sequence: F28D1
    Flanking_sequences: aagtttttagtgtatgagccttcaaaaatt agcacaaacgaacaaataattaaatagtcc
    Mapping_target: F28D1
    Source_location: 7 CHROMOSOME_IV 12388252 12388671 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm3715_external
      tm3715_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 3715
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00009217
    Transcript: F28D1.8.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F28D1.8.1:c.751_1040+77del
        cDNA_position: 751-?
        CDS_position: 751-?
        Protein_position: 251-?
        Intron_number: 6-7/8
        Exon_number: 6-7/9
  Isolation: Mutagen: TMP/UV
  Genetics: Map: IV
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000692 Paper_evidence: WBPaper00048995
        Curator_confirmed: WBPerson12250
        Remark: Figure 3 Paper_evidence: WBPaper00048995
            Curator_confirmed: WBPerson12250
      WBPhenotype:0001360 Paper_evidence: WBPaper00048995
        Curator_confirmed: WBPerson12250
        Remark: Figure 2 Paper_evidence: WBPaper00048995
            Curator_confirmed: WBPerson12250
  Reference: WBPaper00048995
  Remark: 18207/18208-18625/18626 (418 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele