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WormBase Tree Display for Variation: WBVar00252465

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Name Class

WBVar00252465NamePublic_nametm3874
Other_nameF09E8.7b.1:c.960+74_961-24delinsA
F09E8.7a.1:c.1035+74_1036-24delinsA
HGVSgCHROMOSOME_IV:g.13175553_13176068delinsT
Sequence_detailsSMapS_parentSequenceF58D2
Flanking_sequencesggagaatctgaaattaacattttacttgtgggaaataaggaaatgtatgactttttaatt
Mapping_targetF58D2
Source_location7CHROMOSOME_IV1317555213176069Inferred_automaticallyNational_Bioresource_Project
Type_of_mutationInsertionT
Deletion
PCR_producttm3874_external
tm3874_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryFX
AuthorMitani S
DB_infoDatabaseNational_Bioresource_Projectseq3874
NBP_allele
StatusLive
AffectsGeneWBGene00002974
TranscriptF09E8.7a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF09E8.7a.1:c.1035+74_1036-24delinsA
Intron_number5/9
F09E8.7b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF09E8.7b.1:c.960+74_961-24delinsA
Intron_number6/10
IsolationMutagenTMP/UV
GeneticsMapIV
DescriptionPhenotype_not_observedWBPhenotype:0000062Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkClassified as homozygous viable by the National Bioresource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
Remark (3)
MethodNBP_knockout_allele