Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00252517

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00252517NamePublic_nametm3945
Other_nameC49F5.1.3:c.157_573delinsTT
C49F5.1.2:c.157_573delinsTT
C49F5.1.1:c.157_573delinsTT
CE08852:p.Met53LeufsTer98
HGVSgCHROMOSOME_X:g.11966237_11966707delinsTT
Sequence_detailsSMapS_parentSequenceC49F5
Flanking_sequencestgcgagaccgtaacaaaaactggtatggttgtctctacccaacactctccagatgttact
Mapping_targetC49F5
Source_location7CHROMOSOME_X1196623611966708Inferred_automaticallyNational_Bioresource_Project
Type_of_mutationInsertionTT
Deletion
PCR_producttm3945_external
tm3945_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryFX
AuthorMitani S
DB_infoDatabaseNational_Bioresource_Projectseq3945
NBP_allele
StatusLive
AffectsGeneWBGene00008205
TranscriptC49F5.1.3 (11)
C49F5.1.1 (11)
C49F5.1.2 (11)
IsolationMutagenTMP/UV
GeneticsMapX
DescriptionPhenotypeWBPhenotype:0000062Person_evidenceWBPerson7743
Curator_confirmedWBPerson2021
RemarkClassified as lethal OR sterile by the National Bioresource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson2021
WBPhenotype:0000688Person_evidenceWBPerson7743
Curator_confirmedWBPerson2021
RemarkClassified as lethal OR sterile by the National Bioresource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson2021
Remark7540/7541-TT-8011/8012 (471 bp deletion + 2 bp insertion)
This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use.Paper_evidenceWBPaper00041807
MethodNBP_knockout_allele