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WormBase Tree Display for Variation: WBVar00252612

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Name Class

WBVar00252612NamePublic_nametm4057
HGVSgCHROMOSOME_V:g.14991096_14991262del
Sequence_detailsSMapS_parentSequenceT01C3
Flanking_sequencesgacacaccttttacatattctttctttgtgcttgtaaaagtgagtaaattcgtaaaattc
Mapping_targetT01C3
Source_location7CHROMOSOME_V1499109514991263Inferred_automaticallyNational_Bioresource_Project
Type_of_mutationDeletion
PCR_producttm4057_external
tm4057_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryFX
AuthorMitani S
DB_infoDatabaseNational_Bioresource_Projectseq4057
NBP_allele
StatusLive
AffectsGeneWBGene00011319
WBGene00011318
TranscriptT01C3.1.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
cDNA_position?-31
Exon_number1/10
T01C3.2.1VEP_consequencecoding_sequence_variant,5_prime_UTR_variant
VEP_impactMODIFIER
cDNA_position?-95
CDS_position?-75
Protein_position?-25
Exon_number1-2/5
IsolationMutagenTMP/UV
GeneticsMapV
DescriptionPhenotypeWBPhenotype:0000062Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkClassified as lethal OR sterile by the National Bioresource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
WBPhenotype:0000688Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkClassified as lethal OR sterile by the National Bioresource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
Remark4482/4483-4649/4650 (167 bp deletion)
This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use.Paper_evidenceWBPaper00041807
MethodNBP_knockout_allele