WormBase Tree Display for Variation: WBVar00252744

WBVar00252744 Name: Public_name: tm4227
    HGVSg: CHROMOSOME_X:g.10481042_10481688del
  Sequence_details: SMap: S_parent: Sequence: C33D3
    Flanking_sequences: agcaagaaaatgttaattgtaatatcttcg gatatacaaactcgtaagtcatgttttcaa
    Mapping_target: C33D3
    Source_location: 7 CHROMOSOME_X 10481041 10481689 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm4227_external
      tm4227_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 4227
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00001250
    Transcript: C33D3.1.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-356
        CDS_position: ?-355
        Protein_position: ?-119
        Intron_number: 2-3/10
        Exon_number: 1-4/11
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson2021
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson2021
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson2021
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson2021
  Remark: 3678/3679-4325/4326 (647 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele