WormBase Tree Display for Variation: WBVar00252832

WBVar00252832 Name: Public_name: tm4327
    Other_name: Y69E1A.3.1:c.198+109_409del
    HGVSg: CHROMOSOME_IV:g.10952822_10953202del
  Sequence_details: SMap: S_parent: Sequence: Y69E1A
    Flanking_sequences: aaattccctctataatataatacaagacca aggtattatttaacaaatatccaagttttc
    Mapping_target: Y69E1A
    Source_location: 7 CHROMOSOME_IV 10952821 10953203 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm4327_external
      tm4327_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 4327
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00013475
    Transcript: Y69E1A.3.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y69E1A.3.1:c.198+109_409del
        cDNA_position: ?-471
        CDS_position: ?-409
        Protein_position: ?-137
        Intron_number: 3/8
        Exon_number: 4/9
  Isolation: Mutagen: TMP/UV
  Genetics: Map: IV
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson2021
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson2021
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson2021
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson2021
  Remark: 9629/9630-10010/10011 (381 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele