WormBase Tree Display for Variation: WBVar00252908

WBVar00252908 Name: Public_name: tm4424
    Other_name: F18H3.5.1:c.189+3_687delinsGCATT
    HGVSg: CHROMOSOME_X:g.13516499_13517286delinsAATGC
  Sequence_details: SMap: S_parent: Sequence: H06A10
    Flanking_sequences: tcggcagtaaatttccgatacaatgcaccc acgtcttttccatcatgaaggcttcgaaca
    Mapping_target: H06A10
    Source_location: 7 CHROMOSOME_X 13516498 13517287 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: AATGC
      Deletion
    PCR_product: tm4424_external
      tm4424_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 4424
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00000406
    Transcript: F18H3.5.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F18H3.5.1:c.189+3_687delinsGCATT
        cDNA_position: ?-694
        CDS_position: ?-687
        Protein_position: ?-229
        Intron_number: 3-4/6
        Exon_number: 4-5/7
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson2021
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson2021
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson2021
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson2021
            Laboratory_evidence: FX
  Remark: [H06A10] 9965/9966-AATGC-[H06A10] 10753/10754 (788 bp deletion + 5 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele