WormBase Tree Display for Variation: WBVar00273796
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| WBVar00273796 | Evidence | Paper_evidence | WBPaper00005369 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00273796 | |||
| Other_name | uCE5-3347 | ||||
| cewivar00266609 | |||||
| CE33787:p.Ser395= | |||||
| F46B3.17.1:c.1185T>C | |||||
| HGVSg | CHROMOSOME_V:g.20601325T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | F46B3 | |
| Flanking_sequences | GTCCTGGAGCTCCAGGAGCTGCAGGAATTCGTGGAAAACGTGGAGAATTTGGAGTTCAAGGACAGAAGGGCGTCGATTCGAAAGAATGCACTTGCGAATC | CTGATGAAAGAATCCATTGTAAGCGCGGAGAACTTGGCTTACCTGGCAGTGGAGGCCCAATCACAAGCTATGGGACACCAGATTGATCTGAAAGCTTCTG | |||
| Mapping_target | F46B3 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Analysis | SNP_Swan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000736 | |||
| Transcript | F46B3.17.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F46B3.17.1:c.1185T>C | ||||
| HGVSp | CE33787:p.Ser395= | ||||
| cDNA_position | 1185 | ||||
| CDS_position | 1185 | ||||
| Protein_position | 395 | ||||
| Exon_number | 2/5 | ||||
| Codon_change | tcT/tcC | ||||
| Amino_acid_change | S | ||||
| Reference | WBPaper00005369 | ||||
| Method | SNP_Swan |
