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WormBase Tree Display for Variation: WBVar00274950

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Name Class

WBVar00274950EvidencePaper_evidenceWBPaper00006015
NamePublic_nameut187
Other_nameY44A6D.4.1:c.791G>A
CE35663:p.Arg264Lys
HGVSgCHROMOSOME_V:g.20800127G>A
Sequence_detailsSMapS_parentSequenceY44A6D
Flanking_sequencesaggatctcatcgtgaagtgcaaacacatgaaattcattgcgttccagtggctttgcacca
Mapping_targetY44A6D
Type_of_mutationSubstitutiongaPaper_evidenceWBPaper00006015
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022196
LaboratoryJC
StatusLive
AffectsGeneWBGene00004748
TranscriptY44A6D.4.1 (12)
InteractorWBInteraction000503475
GeneticsInterpolated_map_positionV25.2565
DescriptionPhenotypeWBPhenotype:0000308Paper_evidenceWBPaper00031480
Curator_confirmedWBPerson712
RemarkWeak dauer arrest.Paper_evidenceWBPaper00031480
Curator_confirmedWBPerson712
PenetranceLowPaper_evidenceWBPaper00031480
Curator_confirmedWBPerson712
Phenotype_assayTemperature25CPaper_evidenceWBPaper00031480
Curator_confirmedWBPerson712
WBPhenotype:0001236Paper_evidenceWBPaper00031480
Curator_confirmedWBPerson712
Remarksod-3 mRNA levels are very weakly increased as assayed by real-time reverse transcription. PCR.Paper_evidenceWBPaper00031480
Curator_confirmedWBPerson712
EQ_annotationsLife_stageWBls:0000027PATO:0000460Paper_evidenceWBPaper00031480
Curator_confirmedWBPerson712
Phenotype_not_observedWBPhenotype:0000039Paper_evidenceWBPaper00031480
Curator_confirmedWBPerson712
RemarkAnimals exhibited life spans similar (12.9 2.0, n=102) to normal animals (12.7 2.1 days, n=101).Paper_evidenceWBPaper00031480
Curator_confirmedWBPerson712
Phenotype_assayTreatmentLife span was measured as described in Hu et al. 2006.Paper_evidenceWBPaper00031480
Curator_confirmedWBPerson712
Temperature25Paper_evidenceWBPaper00031480
Curator_confirmedWBPerson712
WBPhenotype:0000436Paper_evidenceWBPaper00031480
Curator_confirmedWBPerson712
RemarkDAF-16::GFP is translocated to the cytoplasm as it is in wild-type animals.Paper_evidenceWBPaper00031480
Curator_confirmedWBPerson712
EQ_annotationsLife_stageWBls:0000024PATO:0000460Paper_evidenceWBPaper00031480
Curator_confirmedWBPerson712
WBls:0000027PATO:0000460Paper_evidenceWBPaper00031480
Curator_confirmedWBPerson712
Phenotype_assayTreatmentAnimals were scored in late L1/ early L2.Paper_evidenceWBPaper00031480
Curator_confirmedWBPerson712
GenotypeDAF-16::GFPPaper_evidenceWBPaper00031480
Curator_confirmedWBPerson712
ReferenceWBPaper00031480
MethodSubstitution_allele