WormBase Tree Display for Variation: WBVar00275345
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| WBVar00275345 | Name | Public_name | y303 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence_details | SeqStatus | Pending_curation | |||||||
| Variation_type | Allele | ||||||||
| Origin | Species | Caenorhabditis elegans | |||||||
| Strain | WBStrain00035140 | ||||||||
| WBStrain00035141 | |||||||||
| Laboratory | TY | ||||||||
| Status | Live | ||||||||
| Affects | Gene | WBGene00001484 | |||||||
| Interactor | WBInteraction000052460 | ||||||||
| WBInteraction000052461 | |||||||||
| WBInteraction000502999 | |||||||||
| Description | Phenotype_not_observed | WBPhenotype:0000066 | Paper_evidence | WBPaper00030931 | |||||
| Curator_confirmed | WBPerson712 | ||||||||
| Remark | 99% hermaphrodite viability (n=1054). | Paper_evidence | WBPaper00030931 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Phenotype_assay | Treatment | Embryos of 6 independent sets of progeny were counted. | Paper_evidence | WBPaper00030931 | |||||
| Curator_confirmed | WBPerson712 | ||||||||
| WBPhenotype:0000114 | Paper_evidence | WBPaper00031121 | |||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Remark | Transcript levels were not elevated for sex-1, ceh-39 or fox-1 above the levels of these transcripts in wild-type XX animals, as assayed by qRT-PCR. | Paper_evidence | WBPaper00031121 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| EQ_annotations | Life_stage | WBls:0000003 | PATO:0000460 | Paper_evidence | WBPaper00031121 | ||||
| Curator_confirmed | WBPerson712 | ||||||||
| Phenotype_assay | Treatment | Transcript levels were normalized to fasn-1, a gene that is not affected by dosage compensation. | Paper_evidence | WBPaper00031121 | |||||
| Curator_confirmed | WBPerson712 | ||||||||
| WBPhenotype:0000135 | Paper_evidence | WBPaper00030931 | |||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Remark | There were no obvious differences in xol-1 transcript levels in XX embryos compared to WT levels as assayed by qRT-PCR. | Paper_evidence | WBPaper00030931 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Phenotype_assay | Genotype | yIs2 | Paper_evidence | WBPaper00030931 | |||||
| Curator_confirmed | WBPerson712 | ||||||||
| WBPhenotype:0000436 | Paper_evidence | WBPaper00030931 | |||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Remark | DPY-27 localized in a punctate pattern to the X chromosome in XX embryos. As assayed by the level of antibody staining by DPY-27 protein in embryos in relation to DNA stained by DAPI. | Paper_evidence | WBPaper00030931 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| WBPhenotype:0000520 | Paper_evidence | WBPaper00030931 | |||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Remark | XX animals are wild type in phenotype. | Paper_evidence | WBPaper00030931 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Reference | WBPaper00030931 | ||||||||
| WBPaper00031121 | |||||||||
| Method | Allele |
