WormBase Tree Display for Variation: WBVar00275698
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WBVar00275698 | Evidence | Paper_evidence | WBPaper00036200 | ||
---|---|---|---|---|---|
Name | Public_name | gk2221 | |||
Other_name | C02C2.1.1:c.283-19C>A | ||||
HGVSg | CHROMOSOME_III:g.7874644C>A | ||||
Sequence_details | SMap | S_parent | Sequence | C02C2 | |
Flanking_sequences | TTTCCAAGAAGAAATGTTCAAGACAAAATGCTTGAAAAACAAAAATAAAA | AAAATTTAAAAATTCTAGGGACGAATGGCAAATGGATGTATCCTACCAAA | |||
Mapping_target | C02C2 | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00037288 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
Analysis | Million_Mutation_Pilot_Project | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00015332 | |||
Transcript | C02C2.1.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C02C2.1.1:c.283-19C>A | ||||
Intron_number | 3/11 | ||||
Isolation | Mutagen | UV/TMP | |||
Reference | WBPaper00036200 | ||||
Remark | Allele identified through whole-genome sequencing by the Gene Knockout Consortium | Paper_evidence | WBPaper00036200 | ||
Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
Method | KO_consortium_allele |