WormBase Tree Display for Variation: WBVar00276041
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WBVar00276041 | Evidence | Paper_evidence | WBPaper00036200 | ||
---|---|---|---|---|---|
Name | Public_name | gk925 | |||
Other_name | C41G7.2.1:c.442C>T | ||||
CE08666:p.Pro148Ser | |||||
HGVSg | CHROMOSOME_I:g.9513097C>T | ||||
Sequence_details | SMap | S_parent | Sequence | C41G7 | |
Flanking_sequences | GCCCGACCAGTGGCACAGAAGCCTATTCTC | CTTCCAAAGTGACGCTTCTTGAGGAGAGAA | |||
Mapping_target | C41G7 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00036970 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
Analysis | Million_Mutation_Pilot_Project | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00002226 | |||
Transcript | C41G7.2.1 | VEP_consequence | missense_variant | ||
VEP_impact | MODERATE | ||||
HGVSc | C41G7.2.1:c.442C>T | ||||
HGVSp | CE08666:p.Pro148Ser | ||||
cDNA_position | 516 | ||||
CDS_position | 442 | ||||
Protein_position | 148 | ||||
Exon_number | 3/6 | ||||
Codon_change | Cct/Tct | ||||
Amino_acid_change | P/S | ||||
Isolation | Mutagen | EMS | |||
Reference | WBPaper00036200 | ||||
Remark | Allele identified through whole-genome sequencing by the Gene Knockout Consortium | Paper_evidence | WBPaper00036200 | ||
Allele confirmed by Sanger sequencing | |||||
Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
Method | KO_consortium_allele |