WormBase Tree Display for Variation: WBVar00276090
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| WBVar00276090 | Evidence | Paper_evidence | WBPaper00036200 | ||
|---|---|---|---|---|---|
| Name | Public_name | ok5908 | |||
| Other_name | C47C12.6a.1:c.822-204C>T | ||||
| C47C12.6f.1:c.822-204C>T | |||||
| C47C12.6a.2:c.822-204C>T | |||||
| C47C12.6c.1:c.822-204C>T | |||||
| C47C12.6g.1:c.762-204C>T | |||||
| C47C12.6d.1:c.822-204C>T | |||||
| C47C12.6e.1:c.822-204C>T | |||||
| C47C12.6b.1:c.822-204C>T | |||||
| HGVSg | CHROMOSOME_X:g.7764979C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C47C12 | |
| Flanking_sequences | AATTAAAAAAAAATTTTTTTTGAGCAGTAT | ATTACGAAATTCGTTCATTTGAGCTCATTT | |||
| Mapping_target | C47C12 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00033306 | ||||
| Laboratory | RB | ||||
| Person | WBPerson46 | ||||
| Analysis | Million_Mutation_Pilot_Project | ||||
| KO_consortium_allele | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000950 | |||
| Transcript | C47C12.6e.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C47C12.6e.1:c.822-204C>T | ||||
| Intron_number | 5/16 | ||||
| C47C12.6c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C47C12.6c.1:c.822-204C>T | ||||
| Intron_number | 5/16 | ||||
| C47C12.6a.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C47C12.6a.2:c.822-204C>T | ||||
| Intron_number | 5/16 | ||||
| C47C12.6b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C47C12.6b.1:c.822-204C>T | ||||
| Intron_number | 5/17 | ||||
| C47C12.6a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C47C12.6a.1:c.822-204C>T | ||||
| Intron_number | 6/17 | ||||
| C47C12.6d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C47C12.6d.1:c.822-204C>T | ||||
| Intron_number | 5/15 | ||||
| C47C12.6f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C47C12.6f.1:c.822-204C>T | ||||
| Intron_number | 5/14 | ||||
| C47C12.6g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C47C12.6g.1:c.762-204C>T | ||||
| Intron_number | 8/18 | ||||
| Isolation | Mutagen | EMS | |||
| Reference | WBPaper00036200 | ||||
| Remark | Allele identified through whole-genome sequencing by the Gene Knockout Consortium | Paper_evidence | WBPaper00036200 | ||
| Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
| Method | KO_consortium_allele |
