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WormBase Tree Display for Variation: WBVar00276581

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Name Class

WBVar00276581EvidencePaper_evidenceWBPaper00036200
NamePublic_nameok5596
Other_nameF45E10.1f.1:c.623-92G>A
F45E10.1g.1:c.1547-92G>A
F45E10.1a.1:c.1547-92G>A
F45E10.1e.1:c.287-92G>A
F45E10.1c.1:c.1547-92G>A
F45E10.1d.1:c.1145-92G>A
F45E10.1b.1:c.1547-92G>A
F45E10.1h.1:c.1547-92G>A
HGVSgCHROMOSOME_II:g.11067854C>T
Sequence_detailsSMapS_parentSequenceF45E10
Flanking_sequencesAAGATTCCTAGTTTTGACAAAAATTTATAGCCAAGTCTGAAAATCGCCGAAAAGTCGGAA
Mapping_targetF45E10
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00033306
LaboratoryRB
PersonWBPerson46
AnalysisMillion_Mutation_Pilot_Project
KO_consortium_allele
StatusLive
AffectsGeneWBGene00006788
TranscriptF45E10.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1b.1:c.1547-92G>A
Intron_number11/22
F45E10.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1a.1:c.1547-92G>A
Intron_number12/23
F45E10.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1f.1:c.623-92G>A
Intron_number4/15
F45E10.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1c.1:c.1547-92G>A
Intron_number11/23
F45E10.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1e.1:c.287-92G>A
Intron_number3/14
F45E10.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1d.1:c.1145-92G>A
Intron_number9/20
F45E10.1g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1g.1:c.1547-92G>A
Intron_number11/21
F45E10.1h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1h.1:c.1547-92G>A
Intron_number11/21
IsolationMutagenEMS
ReferenceWBPaper00036200
RemarkAllele identified through whole-genome sequencing by the Gene Knockout ConsortiumPaper_evidenceWBPaper00036200
Sequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele