WormBase Tree Display for Variation: WBVar00276721

WBVar00276721 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: ok5512
    Other_name: F55C7.7i.2:c.4904-841T>A
      F55C7.7i.1:c.4904-841T>A
      F55C7.7g.1:c.224-841T>A
      F55C7.7a.1:c.4904-841T>A
      F55C7.7f.1:c.341-841T>A
      F55C7.7c.1:c.224-841T>A
    HGVSg: CHROMOSOME_I:g.4011693A>T
  Sequence_details: SMap: S_parent: Sequence: F55C7
    Flanking_sequences: GATTTAAAAACGATTTGATAGATGGAGAAG TGAAGTGAAGCAATATCGCACGGGGAAATC
    Mapping_target: F55C7
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00033306
    Laboratory: RB
    Person: WBPerson46
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00006805
    Transcript: F55C7.7i.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F55C7.7i.1:c.4904-841T>A
        Intron_number: 19/25
      F55C7.7g.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F55C7.7g.1:c.224-841T>A
        Intron_number: 4/10
      F55C7.7f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F55C7.7f.1:c.341-841T>A
        Intron_number: 4/17
      F55C7.7a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F55C7.7a.1:c.4904-841T>A
        Intron_number: 20/33
      F55C7.7c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F55C7.7c.1:c.224-841T>A
        Intron_number: 4/17
      F55C7.7i.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F55C7.7i.2:c.4904-841T>A
        Intron_number: 19/24
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele