WormBase Tree Display for Variation: WBVar00276789

WBVar00276789 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: ok5559
    Other_name: F59H6.8.1:c.*16+3296A>G
      F59H6.2:n.2119+8T>C
    HGVSg: CHROMOSOME_II:g.2022330T>C
  Sequence_details: SMap: S_parent: Sequence: F59H6
    Flanking_sequences: ATCGAAGCTCTTGGAATTGCGATGTAGGAA TTGTAATACCACTAAAACTCTTGATTGATT
    Mapping_target: F59H6
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00033306
    Laboratory: RB
    Person: WBPerson46
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00019133
      WBGene00019138
    Transcript: F59H6.8.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F59H6.8.1:c.*16+3296A>G
        Intron_number: 6/6
    Pseudogene: F59H6.2 VEP_consequence: splice_region_variant,intron_variant,non_coding_transcript_variant
        VEP_impact: LOW
        HGVSc: F59H6.2:n.2119+8T>C
        Intron_number: 13/14
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele