WormBase Tree Display for Variation: WBVar00276805
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WBVar00276805 | Evidence | Paper_evidence | WBPaper00036200 | ||
---|---|---|---|---|---|
Name | Public_name | gk2199 | |||
Other_name | H15N14.4:n.159+462T>G | ||||
HGVSg | CHROMOSOME_I:g.7780082T>G | ||||
Sequence_details | SMap | S_parent | Sequence | H15N14 | |
Flanking_sequences | AGCAGCAAAATTTTTCCGCCACGAAATTTT | CAGCAGCAAAATTTTTCGGCGGCGAAATTT | |||
Mapping_target | H15N14 | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00037288 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
Analysis | Million_Mutation_Pilot_Project | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00077552 | |||
Pseudogene | H15N14.4 | VEP_consequence | intron_variant,non_coding_transcript_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | H15N14.4:n.159+462T>G | ||||
Intron_number | 2/3 | ||||
Isolation | Mutagen | UV/TMP | |||
Reference | WBPaper00036200 | ||||
Remark | Allele identified through whole-genome sequencing by the Gene Knockout Consortium | Paper_evidence | WBPaper00036200 | ||
Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
Method | KO_consortium_allele |