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WormBase Tree Display for Variation: WBVar00277139

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Name Class

WBVar00277139EvidencePaper_evidenceWBPaper00036200
NamePublic_nameok5420
Other_nameR31.2a.1:c.798+947G>A
R31.2b.1:c.483+947G>A
HGVSgCHROMOSOME_V:g.11921906G>A
Sequence_detailsSMapS_parentSequenceR31
Flanking_sequencesTTTTGAGTAGAGTAGATCAAATGTTTTCGAGCGCTTGAAATTTTGAAACAAAATTACAAA
Mapping_targetR31
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00033305
LaboratoryRB
PersonWBPerson46
AnalysisMillion_Mutation_Pilot_Project
KO_consortium_allele
StatusLive
AffectsGeneWBGene00011270
TranscriptR31.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR31.2b.1:c.483+947G>A
Intron_number3/5
R31.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR31.2a.1:c.798+947G>A
Intron_number5/8
IsolationMutagenENU
ReferenceWBPaper00036200
RemarkAllele identified through whole-genome sequencing by the Gene Knockout ConsortiumPaper_evidenceWBPaper00036200
Sequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele