WormBase Tree Display for Variation: WBVar00277202

WBVar00277202 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: ok5875
    Other_name: T06F4.1e.1:c.27-6444G>A
      T06F4.1c.1:c.53+3918G>A
      T06F4.1a.1:c.53+3918G>A
    HGVSg: CHROMOSOME_X:g.4067479C>T
  Sequence_details: SMap: S_parent: Sequence: T06F4
    Flanking_sequences: AAAAATGTTCTGAAAATTAATATTGCACTC CTATTAGTCTTGCACTCCCTATTAGTATTG
    Mapping_target: T06F4
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00033306
    Laboratory: RB
    Person: WBPerson46
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00020294
    Transcript: T06F4.1e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T06F4.1e.1:c.27-6444G>A
        Intron_number: 1/6
      T06F4.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T06F4.1a.1:c.53+3918G>A
        Intron_number: 2/7
      T06F4.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T06F4.1c.1:c.53+3918G>A
        Intron_number: 2/8
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele