WormBase Tree Display for Variation: WBVar00277224
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WBVar00277224 | Evidence | Paper_evidence | WBPaper00036200 | ||
---|---|---|---|---|---|
Name | Public_name | ok5743 | |||
Other_name | CE17230:p.Ile75= | ||||
T08H10.1.1:c.225C>T | |||||
HGVSg | CHROMOSOME_V:g.4484204C>T | ||||
Sequence_details | SMap | S_parent | Sequence | T08H10 | |
Flanking_sequences | CTCATCTGGAAAACTGAAACGCGAGGACAT | TTCGTCACCTCTAAACTTCCATTTACCGCT | |||
Mapping_target | T08H10 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00033306 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
Analysis | Million_Mutation_Pilot_Project | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00020369 | |||
Transcript | T08H10.1.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | T08H10.1.1:c.225C>T | ||||
HGVSp | CE17230:p.Ile75= | ||||
cDNA_position | 271 | ||||
CDS_position | 225 | ||||
Protein_position | 75 | ||||
Exon_number | 3/6 | ||||
Codon_change | atC/atT | ||||
Amino_acid_change | I | ||||
Isolation | Mutagen | EMS | |||
Reference | WBPaper00036200 | ||||
Remark | Allele identified through whole-genome sequencing by the Gene Knockout Consortium | Paper_evidence | WBPaper00036200 | ||
Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
Method | KO_consortium_allele |