WormBase Tree Display for Variation: WBVar00277231
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WBVar00277231 | Evidence | Paper_evidence | WBPaper00036200 | ||
---|---|---|---|---|---|
Name | Public_name | ok5385 | |||
Other_name | CE18237:p.Lys92Ter | ||||
T10B5.7a.1:c.274A>T | |||||
HGVSg | CHROMOSOME_V:g.1846700A>T | ||||
Sequence_details | SMap | S_parent | Sequence | T10B5 | |
Flanking_sequences | TCCGGTTTGACACTGGTGTCGCATGATGAT | AGGCAATTATCATTGCGTTCAGGTGAGAGG | |||
Mapping_target | T10B5 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00033305 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
Analysis | Million_Mutation_Pilot_Project | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00020393 | |||
Transcript | T10B5.7a.1 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | T10B5.7a.1:c.274A>T | ||||
HGVSp | CE18237:p.Lys92Ter | ||||
cDNA_position | 306 | ||||
CDS_position | 274 | ||||
Protein_position | 92 | ||||
Exon_number | 4/8 | ||||
Codon_change | Aag/Tag | ||||
Amino_acid_change | K/* | ||||
Isolation | Mutagen | ENU | |||
Reference | WBPaper00036200 | ||||
Remark | Allele identified through whole-genome sequencing by the Gene Knockout Consortium | Paper_evidence | WBPaper00036200 | ||
Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
Method | KO_consortium_allele |